#define MICHLIB_NOSOURCE #include "layereddata.h" MString LayeredData::Info() const { if(!isOk()) return ""; MString d; for(size_t i = 0; i < NDepths(); i++) d += MString(" ") + "(" + i + " " + Depth(i) + ")"; std::set vars; for(const auto& f: nc) { auto head = f.Header(); for(const auto& v: head.Variables()) { auto ret = f.A(v.Name(), "standard_name"); if(!ret) continue; vars.emplace(StName2Name(ret)); } } MString svars; { bool first = true; for(const auto& v: vars) { svars += (first ? "" : ", ") + v; first = false; } } // clang-format off return "Dataset: " + Title() + "\n" + " Begin date: " + Time(0).ToString() + "\n" + " End date: " + Time(NTimes()-1).ToString() + "\n" + " Time step: " + Timestep() + " seconds\n" + " Time moments: " + NTimes() + "\n" + " Region: (" + lonb + " : " + lone + ") x (" + latb + " : " + late + ")\n" + " Grid: " + nx + "x" + ny + " (" + lonstep + " x " + latstep + ")\n" + " Depths:" + d + "\n" + " Supported variables: " + svars; // clang-format on } MString LayeredData::Open(const MString& dataset) { nc.clear(); MString proxyurl = GPL.ParameterSValue("USEPROXY", ""); if(proxyurl.Exist()) proxy.Activate("all_proxy", proxyurl); urls.clear(); size_t i = 1; while(true) { MString url = GPL.ParameterSValue(dataset + "_URL" + i, ""); if(url.Exist()) urls.emplace_back(std::move(url)); else break; i++; } if(urls.size() == 0) return "No urls for dataset " + dataset + " specified in config"; nc.resize(urls.size()); for(size_t i = 0; i < urls.size(); i++) { nc[i].Reset(urls[i] + "#cache&noprefetch"); if(!nc[i]) { nc.clear(); return "Can't connect to database"; } } auto head = nc[0].Header(); lonname = latname = ""; for(const auto& dim: head.Dimensions()) { if(dim.Name() == "lon" || dim.Name() == "longitude") { lonname = dim.Name(); nx = dim.Len(); } if(dim.Name() == "lat" || dim.Name() == "latitude") { latname = dim.Name(); ny = dim.Len(); } } if(!(lonname.Exist() && latname.Exist())) { nc.clear(); return "Can't find longitude/latitude"; } auto rdepths = nc[0].VR("depth"); if(!rdepths) { nc.clear(); return "Can't read depths"; } depths.resize(rdepths.DimLen(0)); for(size_t i = 0; i < depths.size(); i++) depths[i] = rdepths(i); auto time = nc[0].VR("time"); if(!time) { nc.clear(); return "Can't read times"; } MDateTime refdate; { auto units = nc[0].Attribute("time", "units"); if(!units) { nc.clear(); return "Can't read refdate"; } MString rstr; auto words = michlib::Split_on_words(units); auto ci = words.begin(); if(ci != words.end()) ci++; // skip "hours" if(ci != words.end()) ci++; // skip "since" if(ci != words.end()) rstr = *ci; // Day if(ci != words.end()) ci++; if(ci != words.end()) rstr += " " + *ci; // Hours if(!refdate.FromString(rstr)) { nc.clear(); return "Can't parse " + rstr + " to refdate"; } } times.resize(time.DimLen(0)); for(size_t i = 0; i < times.size(); i++) times[i] = refdate + static_cast(time(i)) * 3600; auto lons = nc[0].VR(lonname); auto lats = nc[0].VR(latname); if(!(lons && lats)) { nc.clear(); return "Can't get longitudes/latitudes"; } lonb = lons(0); latb = lats(0); lone = lons(nx - 1); late = lats(ny - 1); lonstep = (lone - lonb) / (nx - 1); latstep = (late - latb) / (ny - 1); return ""; } std::pair LayeredData::Parameters(michlib_internal::ParameterListEx& pars, const CLArgs& args) const { std::unique_ptr ppar{new struct Parameters}; if(!args.contains("var")) return {nullptr, "Variable not specified"}; ppar->varname = args.at("var"); if(!VarNameLoc(ppar->varname).first.Exist()) return {nullptr, "Variable " + ppar->varname + " not exists in this dataset"}; if(args.contains("layer")) ppar->layer = args.at("layer").ToInteger(); if(!args.contains("depth") && ppar->layer >= NDepths()) return {nullptr, MString("Layer ") + ppar->layer + " is too deep!"}; real depth = args.contains("depth") ? args.at("depth").ToReal() : Depth(ppar->layer); if(!(args.contains("lonb") && args.contains("lone") && args.contains("latb") && args.contains("late"))) return {nullptr, "Region not specified (lonb, lone, latb, late)"}; { auto dom = DetGeoDomain(lonb, lone); real lon1 = ToGeoDomain(args.at("lonb").ToReal(), dom); real lon2 = ToGeoDomain(args.at("lone").ToReal(), dom); real lat1 = args.at("latb").ToReal(); real lat2 = args.at("late").ToReal(); ppar->yb = static_cast(Floor((lat1 - latb) / latstep)); ppar->ye = static_cast(Ceil((lat2 - latb) / latstep)); if(ppar->ye > ny - 1) ppar->ye = ny - 1; if(ppar->yb >= ppar->ye) return {nullptr, "Latb must be lesser then late"}; ppar->xb = static_cast(Floor((lon1 - lonb) / lonstep)); ppar->xe = static_cast(Ceil((lon2 - lonb) / lonstep)); if(ppar->xb == ppar->xe) return {nullptr, "Lonb must be not equal late"}; if(depth < 0.0 || depth > depths.back()) ppar->layer = (depth < 0.0) ? 0 : (depths.size() - 1); else for(size_t i = 0; i < depths.size() - 1; i++) { if(depth >= depths[i] && depth <= depths[i + 1]) { ppar->layer = (depth - depths[i] <= depths[i + 1] - depth) ? i : (i + 1); break; } } } pars.SetParameter("variable", ppar->varname); pars.SetParameter("depth", Depth(ppar->layer)); pars.SetParameter("layer", ppar->layer); pars.SetParameter("dataset", Title()); pars.SetParameter("lonb", Lon(ppar->xb)); pars.SetParameter("latb", Lat(ppar->yb)); pars.SetParameter("lone", Lon(ppar->xe)); pars.SetParameter("late", Lat(ppar->ye)); return {ppar.release(), ""}; } LayeredData::Data LayeredData::Read(const BaseParameters* ip, size_t i) const { if(!isOk()) return Data(); bool nodepth = false; auto p = dynamic_cast(ip); auto [name, id] = VarNameLoc(p->varname); auto head = nc[id].Header(); for(const auto& v: head.Variables()) if(v.Name() == name) { if(v.Dimensions().size() == 3) nodepth = true; if(v.Type().Id() == NC_SHORT) return ReadVarRaw(nc[id], name, i, nodepth, p); if(v.Type().Id() == NC_FLOAT) return ReadVarRaw(nc[id], name, i, nodepth, p); } return Data(); } template LayeredData::Data LayeredData::ReadVarRaw(const NCFileA& f, const MString& name, size_t i, bool nodepth, const struct LayeredData::Parameters* p) const { real unitmul = 1.0; DataType fill; real offset = 0.0, scale = 1.0; { auto a_fill = f.A(name, "_FillValue"); auto a_offset_d = f.A(name, "add_offset"); auto a_scale_d = f.A(name, "scale_factor"); auto a_offset_f = f.A(name, "add_offset"); auto a_scale_f = f.A(name, "scale_factor"); if(!a_fill) return Data(); fill = a_fill; if(a_offset_d) offset = a_offset_d; if(a_scale_d) scale = a_scale_d; if(a_offset_f) offset = a_offset_f; if(a_scale_f) scale = a_scale_f; } auto unit = f.A(name, "units"); if(unit && (unit.Get() == "m s-1" || unit.Get() == "m/s")) unitmul = 100.0; Data data((p->xb < p->xe) ? (p->xe - p->xb + 1) : (nx + p->xe - p->xb + 1), p->ye - p->yb + 1, Lon(p->xb), Lat(p->yb), lonstep, latstep); if(p->xb < p->xe) { auto var = nodepth ? f.V(name, {lonname, p->xb, p->xe - p->xb + 1}, {latname, p->yb, p->ye - p->yb + 1}, {"time", i, 1}) : f.V(name, {lonname, p->xb, p->xe - p->xb + 1}, {latname, p->yb, p->ye - p->yb + 1}, {"time", i, 1}, {"depth", p->layer, 1}); if(!var) return Data(); if(var.DimLen(0) != data.Nx() || var.DimLen(1) != data.Ny()) return Data(); for(size_t ix = 0; ix < var.DimLen(0); ix++) for(size_t iy = 0; iy < var.DimLen(1); iy++) { DataType v = var(ix, iy); data(ix, iy) = (v == fill) ? Data::Fillval() : ((v * scale + offset) * unitmul); } } else { auto var1 = nodepth ? f.V(name, {lonname, p->xb}, {latname, p->yb, p->ye - p->yb + 1}, {"time", i, 1}) : f.V(name, {lonname, p->xb}, {latname, p->yb, p->ye - p->yb + 1}, {"time", i, 1}, {"depth", p->layer, 1}); auto var2 = nodepth ? f.V(name, {lonname, 0, p->xe + 1}, {latname, p->yb, p->ye - p->yb + 1}, {"time", i, 1}) : f.V(name, {lonname, 0, p->xe + 1}, {latname, p->yb, p->ye - p->yb + 1}, {"time", i, 1}, {"depth", p->layer, 1}); if(!(var1 && var2)) return Data(); if((var1.DimLen(0) + var2.DimLen(0)) != data.Nx() || var1.DimLen(1) != data.Ny() || var2.DimLen(1) != data.Ny()) return Data(); for(size_t ix = 0; ix < var1.DimLen(0); ix++) for(size_t iy = 0; iy < var1.DimLen(1); iy++) { DataType v = var1(ix, iy); data(ix, iy) = (v == fill) ? Data::Fillval() : ((v * scale + offset) * unitmul); } for(size_t ix = 0; ix < var2.DimLen(0); ix++) for(size_t iy = 0; iy < var2.DimLen(1); iy++) { DataType v = var2(ix, iy); data(ix + var1.DimLen(0), iy) = (v == fill) ? Data::Fillval() : ((v * scale + offset) * unitmul); } } return data; }